The TropGeneDB CIRAD information system contains various kinds of data on tropical and mediterranean plants : marker, QTL, genotype, genetic, phenotype, cartography (genetic, physical and linkage disequilibrium maps), linkage disequilibrium, association and germplasm. The plants concerned are banana, breadfruit, citrus, cocoa, coconut palm, cotton, oil palm, rice, rubber, sorghum and sugarcane. The Information System has a database per plant. The data were produced by CIRAD researchers or by CIRAD researchers and colleagues associated in research projects. All The data have been published. The latest reference for TropGeneDB is : Chantal Hamelin, Guilhem Sempere, Vincent Jouffe and Manuel Ruiz, (2012), "TropGeneDB, the multi-tropical crop information system updated and extended", Nucl. Acids Res. (2012), doi: 10.1093/nar/gks1105. As there have been no new developments on TropGeneDB and it is unlikely that the system will be maintained in the long term, we have extracted all the data that we have deposited in the Dataverse.
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6 août 2024 - TropGene Coconut
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6 août 2024 - TropGene Coconut
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6 août 2024 - TropGene Coconut
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6 août 2024
Hamelin, Chantal, 2024, "TropGene Coffee", https://doi.org/10.18167/DVN1/BPI9YJ, CIRAD Dataverse, V1
The data come from the TropGeneDB CIRAD information system (https://tropgenedb.cirad.fr/tropgene/JSP/index.jsp). TropGeneDB contains data from studies on tropical and mediterranean plants for various kinds of topics such as marker, QTL, genotype, genetic, phenotype, cartography (...
6 août 2024 - TropGene Coffee
ZIP Archive - 1,0 MB - MD5: e48da582f8f011a82ecab6b6c39e3920
This file hosts : - Allele Frequencies by Population for Codo - Allele Frequencies by Locus for Codominant Data - Allele Frequencies by Population with Graph over Loci for Codominant Data - Heterozygosity, Fstatistics and Polymorphism by Population for Codominant Data - Heterozyg...
6 août 2024 - TropGene Coffee
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6 août 2024 - TropGene Coffee
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6 août 2024 - TropGene Coffee
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6 août 2024 - TropGene Coffee
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6 août 2024 - TropGene Coffee
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