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31 to 40 of 64 Results

edger_BOR_3DPI_0_13107_nested_IN_IPA.txt 2 déc. 2022 - Whole blood transcriptome data of five West African cattle breeds before and during an infection by Trypanosoma congolense IL1180, inference on bovine trypanotolerance Plain Text - 1,9 MB - MD5: ab275597527726aeff297b1100e856af Data Output table for the within -breed differential expression analysis in BOR (13108 raws * 8 columns) -> input table in IPA®
edger_LA_3DPI_0_13107_nested_IN_IPA.txt 2 déc. 2022 - Whole blood transcriptome data of five West African cattle breeds before and during an infection by Trypanosoma congolense IL1180, inference on bovine trypanotolerance Plain Text - 1,9 MB - MD5: f5895ce74d5cf1f7ebf6b47728149bb8 Data Output table for the within-breed differential expression analysis in LAG (13108 raws * 8 columns) -> input table in IPA®
edger_NDA_3DPI_0_13107_nested_IN_IPA.txt 2 déc. 2022 - Whole blood transcriptome data of five West African cattle breeds before and during an infection by Trypanosoma congolense IL1180, inference on bovine trypanotolerance Plain Text - 1,9 MB - MD5: c1878eb0945e2c3063f231cccfee6097 Data Output table for the within -breed differential expression analysis in NDA (13108 raws * 8 columns) -> input table in IPA®
edger_race_ZFU_0_13107_IN_IPA.txt 2 déc. 2022 - Whole blood transcriptome data of five West African cattle breeds before and during an infection by Trypanosoma congolense IL1180, inference on bovine trypanotolerance Plain Text - 2,3 MB - MD5: 86b92d5597ed942c6e8c8560b6e1496f Data Output table for the between-breed differential expression analysis at DPI.0 with ZFU as reference (13108 raws * 8 columns) -> input table in IPA®
edger_ZFU_3DPI_0_13107_nested_IN_IPA.txt 2 déc. 2022 - Whole blood transcriptome data of five West African cattle breeds before and during an infection by Trypanosoma congolense IL1180, inference on bovine trypanotolerance Plain Text - 1,9 MB - MD5: 7edefd470f1cf41c7083d420ed438bd7 Data Output table for the within -breed differential expression analysis in ZFU (13108 raws * 8 columns) -> input table in IPA®
gene_annot_13107_IPA_E92.1.txt 2 déc. 2022 - Whole blood transcriptome data of five West African cattle breeds before and during an infection by Trypanosoma congolense IL1180, inference on bovine trypanotolerance Plain Text - 2,1 MB - MD5: 97077e15f83c4e64347399f935c27755 Data Gene file annotation (13108 raw * 18 columns)
loca_programs.conf 2 déc. 2022 - Whole blood transcriptome data of five West African cattle breeds before and during an infection by Trypanosoma congolense IL1180, inference on bovine trypanotolerance Plain Text - 307 B - MD5: 77aaaf386059a6760565ce398a704543 Code script: Path to each required program for the mapping with STAR
process_RNAseq_AATTOL.py 2 déc. 2022 - Whole blood transcriptome data of five West African cattle breeds before and during an infection by Trypanosoma congolense IL1180, inference on bovine trypanotolerance Python Source Code - 30,9 KB - MD5: ea5e1481e0d533f0c1fa52ea870a7aaa Code script: Script to run the mapping with STAR
Molecular epidemiology of Animal African Trypanosomosis in southwest Burkina Faso 20 juin 2022 Hounyèmè, Robert Eustache, 2022, "Molecular epidemiology of Animal African Trypanosomosis in southwest Burkina Faso", https://doi.org/10.18167/DVN1/OBRN6E, CIRAD Dataverse, V1, UNF:6:kRbxOTHJzivZI2tKgzaabw== [fileUNF] The data presented relates to the article entitled: “Molecular epidemiology of Animal African Trypanosomosis in southwest Burkina Faso”. Blood samples were collected in April and May 2019 in the Hauts-Bassins, Cascades and Sud-Ouest regions of Burkina Faso. Clinical data were rec...
Data_ELISA_AAT_2019.tab 20 juin 2022 - Molecular epidemiology of Animal African Trypanosomosis in southwest Burkina Faso Tabular Data - 106,7 KB - 188 Variables, 48 Observations - UNF:6:S9P11lJHk9At9pYwaGUOhQ== This file contains four sheets presenting the raw ELISA data for antibody detection of 1) Trypanosoma brucei, 2) Trypanosoma congolense, 3) Trypanosoma vivax and their 4) relative positivity percentages (RPP). Sheets 1, 2 and 3 named respectively "T. brucei", "T. congolense" and...

edger_BOR_3DPI_0_13107_nested_IN_IPA.txt

2 déc. 2022 - Whole blood transcriptome data of five West African cattle breeds before and during an infection by Trypanosoma congolense IL1180, inference on bovine trypanotolerance

Plain Text - 1,9 MB -

Data

Output table for the within -breed differential expression analysis in BOR (13108 raws * 8 columns) -> input table in IPA®

edger_LA_3DPI_0_13107_nested_IN_IPA.txt

2 déc. 2022 - Whole blood transcriptome data of five West African cattle breeds before and during an infection by Trypanosoma congolense IL1180, inference on bovine trypanotolerance

Plain Text - 1,9 MB -

Data

Output table for the within-breed differential expression analysis in LAG (13108 raws * 8 columns) -> input table in IPA®

edger_NDA_3DPI_0_13107_nested_IN_IPA.txt

2 déc. 2022 - Whole blood transcriptome data of five West African cattle breeds before and during an infection by Trypanosoma congolense IL1180, inference on bovine trypanotolerance

Plain Text - 1,9 MB -

Data

Output table for the within -breed differential expression analysis in NDA (13108 raws * 8 columns) -> input table in IPA®

edger_race_ZFU_0_13107_IN_IPA.txt

2 déc. 2022 - Whole blood transcriptome data of five West African cattle breeds before and during an infection by Trypanosoma congolense IL1180, inference on bovine trypanotolerance

Plain Text - 2,3 MB -

Data

Output table for the between-breed differential expression analysis at DPI.0 with ZFU as reference (13108 raws * 8 columns) -> input table in IPA®

edger_ZFU_3DPI_0_13107_nested_IN_IPA.txt

2 déc. 2022 - Whole blood transcriptome data of five West African cattle breeds before and during an infection by Trypanosoma congolense IL1180, inference on bovine trypanotolerance

Plain Text - 1,9 MB -

Data

Output table for the within -breed differential expression analysis in ZFU (13108 raws * 8 columns) -> input table in IPA®

gene_annot_13107_IPA_E92.1.txt

2 déc. 2022 - Whole blood transcriptome data of five West African cattle breeds before and during an infection by Trypanosoma congolense IL1180, inference on bovine trypanotolerance

Plain Text - 2,1 MB -

Data

Gene file annotation (13108 raw * 18 columns)

loca_programs.conf

2 déc. 2022 - Whole blood transcriptome data of five West African cattle breeds before and during an infection by Trypanosoma congolense IL1180, inference on bovine trypanotolerance

Plain Text - 307 B -

Code

script: Path to each required program for the mapping with STAR

process_RNAseq_AATTOL.py

2 déc. 2022 - Whole blood transcriptome data of five West African cattle breeds before and during an infection by Trypanosoma congolense IL1180, inference on bovine trypanotolerance

Python Source Code - 30,9 KB -

Code

script: Script to run the mapping with STAR

Molecular epidemiology of Animal African Trypanosomosis in southwest Burkina Faso

20 juin 2022

Hounyèmè, Robert Eustache, 2022, "Molecular epidemiology of Animal African Trypanosomosis in southwest Burkina Faso", https://doi.org/10.18167/DVN1/OBRN6E, CIRAD Dataverse, V1, UNF:6:kRbxOTHJzivZI2tKgzaabw== [fileUNF]

The data presented relates to the article entitled: “Molecular epidemiology of Animal African Trypanosomosis in southwest Burkina Faso”. Blood samples were collected in April and May 2019 in the Hauts-Bassins, Cascades and Sud-Ouest regions of Burkina Faso. Clinical data were rec...

Data_ELISA_AAT_2019.tab

20 juin 2022 - Molecular epidemiology of Animal African Trypanosomosis in southwest Burkina Faso

Tabular Data - 106,7 KB - 188 Variables, 48 Observations -

This file contains four sheets presenting the raw ELISA data for antibody detection of 1) Trypanosoma brucei, 2) Trypanosoma congolense, 3) Trypanosoma vivax and their 4) relative positivity percentages (RPP). Sheets 1, 2 and 3 named respectively "T. brucei", "T. congolense" and...

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