UMR CBGP

L’UMR CBGP – Centre de Biologie pour la Gestion des Populations – a pour vocation de comprendre les mécanismes qui régissent l’évolution de populations d'organismes importants pour l’agronomie, les forêts, la santé humaine ou la conservation de la biodiversité. Les recherches portent sur des modèles biologiques et sont développées selon six axes : origine et caractérisation de la biodiversité ; adaptation des phytophages, de leurs ennemis naturels et de leurs symbiontes ; écologie et évolution des zoonoses ; biologie, écologie et évolution des espèces envahissantes ; génomique statistique et évolutive des populations ; approches moléculaires et bioinformatiques haut débit. Nos tutelles sont l'INRAE, le CIRAD, l'IRD et l'Institut Agro-Montpellier.

UMR CBGP – Centre de Biologie pour la Gestion des Populations – aims to understand the mechanisms that govern populations of organisms that are important to agriculture, forest, human health and biodiversity conservation. Studies concern biological models and follow six lines of research: origin and characterization of biodiversity; adaptation of plant eaters, their natural enemies and symbionts; ecology and evolution of zoonoses; biology, ecology and evolution of invasive species; statistical and evolutionary population genomics; and high-throughput molecular and bioinformatics techniques. Our supervising bodies are INRAE, CIRAD, IRD and Institut Agro-Montpellier.

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111 to 120 of 148 Results

database_bacteria_functions.txt 29 août 2022 - Original data for "Javal et al. 2022. Does host plant drive variation in microbial gut communities in a recently shifted pest? Microbial Ecology (2022)" Plain Text - 33,5 KB - MD5: 182e98d0d85a34a2c9dd1a8b7faa31ed Literature database on known functions of bacterial genera identified in insects. Categories are modified from Engel P, Moran NA. (2013) The gut microbiota of insects - diversity in structure and function. FEMS Microbiol Rev., 37,699-735. doi: 10.1111/1574-6976.12025. Epub 2013 J...
insect_bodymass_data.txt 29 août 2022 - Original data for "Javal et al. 2022. Does host plant drive variation in microbial gut communities in a recently shifted pest? Microbial Ecology (2022)" Plain Text - 7,9 KB - MD5: 655df8fea31dd5ca9bd2e2843b8addb3 Growth data on insect larvae: initial mass (at sampling) and mass gain at the end of the experiment.
RScript_statistical_analyses.R 29 août 2022 - Original data for "Javal et al. 2022. Does host plant drive variation in microbial gut communities in a recently shifted pest? Microbial Ecology (2022)" R Syntax - 24,0 KB - MD5: 47f5525d7c089b1f02dceb9db137e142 R script used for statistical analyses.
An agent-based model to simulate the boosted Sterile Insect Technique for fruit fly management 16 mars 2022 DIOUF, Esther; PIOU, Cyril, 2022, "An agent-based model to simulate the boosted Sterile Insect Technique for fruit fly management", https://doi.org/10.18167/DVN1/5WELPP, CIRAD Dataverse, V1 Multi-agent model BOOSTIT source code for NetLogo (v. 6.1.1)
BOOSTIT.nlogo 16 mars 2022 - An agent-based model to simulate the boosted Sterile Insect Technique for fruit fly management text/nlogo - 96,3 KB - MD5: e576d2e676b0583378e36ad43b7c425b Code Suitable for Nlogo 6.1.1
change-state.nls 16 mars 2022 - An agent-based model to simulate the boosted Sterile Insect Technique for fruit fly management Unknown - 1,6 KB - MD5: 311233bbb49c4faa09ed6b80b078c423 Code Part of Nlogo source code. Implementation of the fly surival (development and mortality) and the moult.
CSV_extension.nls 16 mars 2022 - An agent-based model to simulate the boosted Sterile Insect Technique for fruit fly management Unknown - 6,9 KB - MD5: feed3310d545aa7c40369b44d9758e82 Code Part of Nlogo source code. Configuration of daily temperature and sensitivity periods of host plants.
initialize-patches.nls 16 mars 2022 - An agent-based model to simulate the boosted Sterile Insect Technique for fruit fly management Unknown - 2,9 KB - MD5: d5650e0462d8464a294c23b6f946c3eb Code Part of Nlogo source code. Configuration of the four orchards in a landscape .
Readme.txt 16 mars 2022 - An agent-based model to simulate the boosted Sterile Insect Technique for fruit fly management Plain Text - 634 B - MD5: a11c9506b88e32bc2a92297207cbfaf2 Documentation
setup_patches.nls 16 mars 2022 - An agent-based model to simulate the boosted Sterile Insect Technique for fruit fly management Unknown - 8,8 KB - MD5: a978d092801e9aac3b1b0e3a154c8ca2 Code Part of Nlogo source code. Configuration of the different landscapes and host plant composition of the four orchards. The sterile males release zone are also configured.

database_bacteria_functions.txt

29 août 2022 - Original data for "Javal et al. 2022. Does host plant drive variation in microbial gut communities in a recently shifted pest? Microbial Ecology (2022)"

Plain Text - 33,5 KB -

Literature database on known functions of bacterial genera identified in insects. Categories are modified from Engel P, Moran NA. (2013) The gut microbiota of insects - diversity in structure and function. FEMS Microbiol Rev., 37,699-735. doi: 10.1111/1574-6976.12025. Epub 2013 J...

insect_bodymass_data.txt

29 août 2022 - Original data for "Javal et al. 2022. Does host plant drive variation in microbial gut communities in a recently shifted pest? Microbial Ecology (2022)"

Plain Text - 7,9 KB -

Growth data on insect larvae: initial mass (at sampling) and mass gain at the end of the experiment.

RScript_statistical_analyses.R

29 août 2022 - Original data for "Javal et al. 2022. Does host plant drive variation in microbial gut communities in a recently shifted pest? Microbial Ecology (2022)"

R Syntax - 24,0 KB -

R script used for statistical analyses.

An agent-based model to simulate the boosted Sterile Insect Technique for fruit fly management

16 mars 2022

DIOUF, Esther; PIOU, Cyril, 2022, "An agent-based model to simulate the boosted Sterile Insect Technique for fruit fly management", https://doi.org/10.18167/DVN1/5WELPP, CIRAD Dataverse, V1

Multi-agent model BOOSTIT source code for NetLogo (v. 6.1.1)

BOOSTIT.nlogo

16 mars 2022 - An agent-based model to simulate the boosted Sterile Insect Technique for fruit fly management

text/nlogo - 96,3 KB -

Code

Suitable for Nlogo 6.1.1

change-state.nls

16 mars 2022 - An agent-based model to simulate the boosted Sterile Insect Technique for fruit fly management

Unknown - 1,6 KB -

Code

Part of Nlogo source code. Implementation of the fly surival (development and mortality) and the moult.

CSV_extension.nls

16 mars 2022 - An agent-based model to simulate the boosted Sterile Insect Technique for fruit fly management

Unknown - 6,9 KB -

Code

Part of Nlogo source code. Configuration of daily temperature and sensitivity periods of host plants.

initialize-patches.nls

16 mars 2022 - An agent-based model to simulate the boosted Sterile Insect Technique for fruit fly management

Unknown - 2,9 KB -

Code

Part of Nlogo source code. Configuration of the four orchards in a landscape .

Readme.txt

16 mars 2022 - An agent-based model to simulate the boosted Sterile Insect Technique for fruit fly management

Plain Text - 634 B -

Documentation

setup_patches.nls

16 mars 2022 - An agent-based model to simulate the boosted Sterile Insect Technique for fruit fly management

Unknown - 8,8 KB -

Code

Part of Nlogo source code. Configuration of the different landscapes and host plant composition of the four orchards. The sterile males release zone are also configured.

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