UMR CBGP

L’UMR CBGP – Centre de Biologie pour la Gestion des Populations – a pour vocation de comprendre les mécanismes qui régissent l’évolution de populations d'organismes importants pour l’agronomie, les forêts, la santé humaine ou la conservation de la biodiversité. Les recherches portent sur des modèles biologiques et sont développées selon six axes : origine et caractérisation de la biodiversité ; adaptation des phytophages, de leurs ennemis naturels et de leurs symbiontes ; écologie et évolution des zoonoses ; biologie, écologie et évolution des espèces envahissantes ; génomique statistique et évolutive des populations ; approches moléculaires et bioinformatiques haut débit. Nos tutelles sont l'INRAE, le CIRAD, l'IRD et l'Institut Agro-Montpellier.

UMR CBGP – Centre de Biologie pour la Gestion des Populations – aims to understand the mechanisms that govern populations of organisms that are important to agriculture, forest, human health and biodiversity conservation. Studies concern biological models and follow six lines of research: origin and characterization of biodiversity; adaptation of plant eaters, their natural enemies and symbionts; ecology and evolution of zoonoses; biology, ecology and evolution of invasive species; statistical and evolutionary population genomics; and high-throughput molecular and bioinformatics techniques. Our supervising bodies are INRAE, CIRAD, IRD and Institut Agro-Montpellier.

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81 to 90 of 133 Results

Tfafilter.R 2 mai 2023 - Original data for " Chapuis MP et al. (2023). Evaluation of 96-well high-throughput DNA extraction methods for 16S rRNA gene metabarcoding. Molecular Ecology Resources, 23, 1509–1525" R Syntax - 1,3 KB - MD5: dbaf780fd41340ca2766594858d24f5f R function required for the first R script for data filtering.
Readme.txt 2 mai 2023 - Multi-agent model SANDMAN: source code Plain Text - 79 B - MD5: 20c0b79b96fa22c37c51f8fcb7498f2f Documentation Where to download Netlogo
analyze.bayesian.r 18 janv. 2023 - Original data for "Chapuis et al., 2023. Domestication provides durum wheat with protection from locust herbivory. Ecology and Evolution, 13(1): e9741" R Syntax - 12,2 KB - MD5: 8b73c36585b7ed8de08681be90e43c60 Code Wrapping code of BRugs package functions.
Choice_Test_Locust_Controls.txt 18 janv. 2023 - Original data for "Chapuis et al., 2023. Domestication provides durum wheat with protection from locust herbivory. Ecology and Evolution, 13(1): e9741" Plain Text - 7,7 KB - MD5: d4a44c278e6698f725adbb1afbad27a5 Laboratory experimental data: areas of leaf samples used as a control for the effect of climatic variation in the room (in absence of a locust).
Choice_Test_Locust_Tests.txt 18 janv. 2023 - Original data for "Chapuis et al., 2023. Domestication provides durum wheat with protection from locust herbivory. Ecology and Evolution, 13(1): e9741" Plain Text - 12,2 KB - MD5: 7d7d82b6474d0e997ba205a0b2fdf114 Laboratory experimental data: areas of leaf samples following paired-choice tests (in presence of a locust).
DP.txt 18 janv. 2023 - Original data for "Chapuis et al., 2023. Domestication provides durum wheat with protection from locust herbivory. Ecology and Evolution, 13(1): e9741" Plain Text - 1,9 KB - MD5: 5cc635f66b54a3495e135cf592c92878 Field experimental data: the level of damage at the plant-scale (PSLD) measured in Herbivory Cages.
Nitrogen_Wheat_Repeats.txt 18 janv. 2023 - Original data for "Chapuis et al., 2023. Domestication provides durum wheat with protection from locust herbivory. Ecology and Evolution, 13(1): e9741" Plain Text - 1,6 KB - MD5: 3d64d3e1a2b5f6016c2b7ed4a8bfb21b Plant biological data: trait values per repeat x accession for LNC.
RScript_statistical_analyses.R 18 janv. 2023 - Original data for "Chapuis et al., 2023. Domestication provides durum wheat with protection from locust herbivory. Ecology and Evolution, 13(1): e9741" R Source Code - 18,6 KB - MD5: 071a44066d29b88431f8b05836d91dc9 R script to perform for all statistical analyses reported in this study.
Traits_Wheat_Accessions.txt 18 janv. 2023 - Original data for "Chapuis et al., 2023. Domestication provides durum wheat with protection from locust herbivory. Ecology and Evolution, 13(1): e9741" Plain Text - 1,4 KB - MD5: 1ac3acc480e6673e608d1b530b87a12c Plant biological data: mean trait values per accession for SLA, LDMC, SRS, LNC, LPrC, and LChC.
Traits_Wheat_Repeats.txt 18 janv. 2023 - Original data for "Chapuis et al., 2023. Domestication provides durum wheat with protection from locust herbivory. Ecology and Evolution, 13(1): e9741" Plain Text - 2,7 KB - MD5: a272a81d71831702bfa800d0780cf3e9 Plant biological data: trait values per repeat x accession for SLA, LDMC, and SRS.

Tfafilter.R

2 mai 2023 - Original data for " Chapuis MP et al. (2023). Evaluation of 96-well high-throughput DNA extraction methods for 16S rRNA gene metabarcoding. Molecular Ecology Resources, 23, 1509–1525"

R Syntax - 1,3 KB -

R function required for the first R script for data filtering.

Readme.txt

2 mai 2023 - Multi-agent model SANDMAN: source code

Plain Text - 79 B -

Documentation

Where to download Netlogo

analyze.bayesian.r

18 janv. 2023 - Original data for "Chapuis et al., 2023. Domestication provides durum wheat with protection from locust herbivory. Ecology and Evolution, 13(1): e9741"

R Syntax - 12,2 KB -