Pour répondre aux grands enjeux de l'agriculture méditerranéenne et tropicale, l'unité AGAP Institut se donne comme ambition de mettre en synergie une grande diversité de compétences, d'approches et de ressources pour des plantes cultivées mieux adaptées à des agrosystèmes variés.
Les tutelles de l'UMR AGAP Institut sont le CIRAD, l'INRAE, l'institut Agro et l'Université de Montpellier.
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71 to 80 of 439 Results
Ensete_glaucum.gff3
13 janv. 2025 - Source Data to study Genome assemblies of Musa wild banana ancestors and draw figures.
Unknown - 57,1 MB - MD5: 352246db9cf2dbb3548cb04fa61c372b
E. glaucum annotation with liftoff v1.6.3 and used with jcvi v1.1.18 for orthologs gene
Gam_Lietal_Baxijiao_All.svg
13 janv. 2025 - Source Data to study Genome assemblies of Musa wild banana ancestors and draw figures.
SVG Image - 1,9 MB - MD5: 9a1c67a943acfa27b81cfcfd42c64696
Haplotype chromosome painting of Cavendish assembly from Li et al., 2023
GeneAlignments.tar.gz
13 janv. 2025 - Source Data to study Genome assemblies of Musa wild banana ancestors and draw figures.
Gzip Archive - 11,4 MB - MD5: f232eecada13a3fe6d9a14c626b72c8a
10635 orthologous gene CDS alignments used for phylogenetic analysis using phyML v3.1
Group_rDNA_and_REPEATS.tab
13 janv. 2025 - Source Data to study Genome assemblies of Musa wild banana ancestors and draw figures.
Tab-Separated Values - 2,4 KB - MD5: e3afde986f2781e07ede282894f7b3ca
tabulated file to draw repeat density per family (2 columns : Sequence name, sequence group)
Haplotypes.tab
13 janv. 2025 - Source Data to study Genome assemblies of Musa wild banana ancestors and draw figures.
Tab-Separated Values - 342,1 KB - MD5: 108866e2890c724d6f3335c2f4274368
Haplotype chromosome painting layer for circos representation (4 columns: chr, start, end, color)
HuangEtal_Baxijiao.fasta
13 janv. 2025 - Source Data to study Genome assemblies of Musa wild banana ancestors and draw figures.
Unknown - 1,3 GB - MD5: bde63c88750632b817361905de885b4b
Multifasta of Cavendish assembly from Huang et al., 2023
karyotype_all_norm_center.pdf
karyotype_all_norm_center.pdf
13 janv. 2025 - Source Data to study Genome assemblies of Musa wild banana ancestors and draw figures.
Adobe PDF - 437,9 KB - MD5: c31912078a560e82e370c8038383b3ba
Source data for Chromosome synthenic block identified between assemblies using jcvi v1.1.18
karyotype.tab
13 janv. 2025 - Source Data to study Genome assemblies of Musa wild banana ancestors and draw figures.
Tab-Separated Values - 604,5 KB - MD5: 54f8328c71d233d09e47eeeba76d4182
Configuration file containing source data for Fig.6 Karyotype information for circos representation.
Lietal_Baxijiao_All.svg
13 janv. 2025 - Source Data to study Genome assemblies of Musa wild banana ancestors and draw figures.
SVG Image - 2,0 MB - MD5: f14cba32311fa83008b92b9ca3f8d146
Ancestry chromosome painting of Cavendish assembly from Li et al., 2023
LiEtAl_Baxijiao.fasta
13 janv. 2025 - Source Data to study Genome assemblies of Musa wild banana ancestors and draw figures.
Unknown - 1,2 GB - MD5: 5f436a0cb06b0f14450ece34850a64b4
Multifasta of Cavendish assembly from Li et al., 2023
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