UMR AGAP Institut

Pour répondre aux grands enjeux de l'agriculture méditerranéenne et tropicale, l'unité AGAP Institut se donne comme ambition de mettre en synergie une grande diversité de compétences, d'approches et de ressources pour des plantes cultivées mieux adaptées à des agrosystèmes variés.
Les tutelles de l'UMR AGAP Institut sont le CIRAD, l'INRAE, l'institut Agro et l'Université de Montpellier.

Featured Dataverses

In order to use this feature you must have at least one published or linked dataverse.

Publish Dataverse

Are you sure you want to publish your dataverse? Once you do so it must remain published.

Publish Dataverse

This dataverse cannot be published because the dataverse it is in has not been published.

Delete Dataverse

Are you sure you want to delete your dataverse? You cannot undelete this dataverse.

61 to 70 of 439 Results

DH-Pahang.4.3_100000_count.MajR.png 13 janv. 2025 - Source Data to study Genome assemblies of Musa wild banana ancestors and draw figures. PNG Image - 54,0 KB - MD5: c721e0e5c77da2ef4b5387fea89c6e7f png file obtained from chromosome ancestry painting of M.a. ssp malaccensis reference
DH-Pahang.4.3_100000_count.MajR.tab 13 janv. 2025 - Source Data to study Genome assemblies of Musa wild banana ancestors and draw figures. Tab-Separated Values - 221,0 KB - MD5: 8a1582e0821bfbc8173c9e8722e3c874 Tabuled file with M.a. ssp malaccensis reference assembly origin painting to construct chromosome scale figures (6 columns: Name, Chr, start, end, origin, color)
DH-Pahang.4.3.fasta 13 janv. 2025 - Source Data to study Genome assemblies of Musa wild banana ancestors and draw figures. Unknown - 464,8 MB - MD5: b4985be3ae1d95cdb940072a69f48f46 M.a. ssp malaccensis reference assembly in multifasta file
DH-Pahang.4.3.gff3 13 janv. 2025 - Source Data to study Genome assemblies of Musa wild banana ancestors and draw figures. Unknown - 42,2 MB - MD5: fa5f1899e3c72fce54db883de010fa7e DH-Pahang annotation transfered with liftoff v1.6.3 to other assembies
DH-Pahang.gff3 13 janv. 2025 - Source Data to study Genome assemblies of Musa wild banana ancestors and draw figures. Unknown - 63,3 MB - MD5: d866bd52bbf36ac646c43ecb53dce5fa M.a. ssp malaccensis reference annotation with liftoff v1.6.3 and used with jcvi v1.1.18 for orthologs gene and block identification
DYN104_Grande_Naine_1x.svg 13 janv. 2025 - Source Data to study Genome assemblies of Musa wild banana ancestors and draw figures. SVG Image - 158,2 KB - MD5: 2f76b8ef9cbb23d915339c1afd6036b2 Ancestry painting of the 1x gamete contributing to Cavendish projected along DH-Pahang structure from Martin et al., 2023
DYN_2013-098_Mshia_Wa_Komba.svg 13 janv. 2025 - Source Data to study Genome assemblies of Musa wild banana ancestors and draw figures. SVG Image - 196,5 KB - MD5: 1a1606028e35efa5764b3a5d2725453f Ancestry painting of the 2x gamete contributing to Cavendish projected along DH-Pahang structure from Martin et al., 2023
Ensete_glaucum.1.0_100000_count.MajR.png 13 janv. 2025 - Source Data to study Genome assemblies of Musa wild banana ancestors and draw figures. PNG Image - 45,6 KB - MD5: 22e3ef61efe662bcdf6d5efd41a60624 png file obtained from chromosome ancestry painting of E. glaucum
Ensete_glaucum.1.0_100000_count.MajR.tab 13 janv. 2025 - Source Data to study Genome assemblies of Musa wild banana ancestors and draw figures. Tab-Separated Values - 96,0 KB - MD5: fce0a2e3537dc9ec92dd2f45ddc56895 Tabuled file with E. glaucum assembly origin painting to construct chromosome scale figures (6 columns: Name, Chr, start, end, origin, color)
Ensete_glaucum.1.0.fasta 13 janv. 2025 - Source Data to study Genome assemblies of Musa wild banana ancestors and draw figures. Unknown - 466,9 MB - MD5: 567e8bb2f96a1a691a324083f6e720c7 E. glaucum assembly in multifasta file

DH-Pahang.4.3_100000_count.MajR.png

13 janv. 2025 - Source Data to study Genome assemblies of Musa wild banana ancestors and draw figures.

PNG Image - 54,0 KB -

png file obtained from chromosome ancestry painting of M.a. ssp malaccensis reference

DH-Pahang.4.3_100000_count.MajR.tab

13 janv. 2025 - Source Data to study Genome assemblies of Musa wild banana ancestors and draw figures.

Tab-Separated Values - 221,0 KB -

Tabuled file with M.a. ssp malaccensis reference assembly origin painting to construct chromosome scale figures (6 columns: Name, Chr, start, end, origin, color)

DH-Pahang.4.3.fasta

13 janv. 2025 - Source Data to study Genome assemblies of Musa wild banana ancestors and draw figures.

Unknown - 464,8 MB -

M.a. ssp malaccensis reference assembly in multifasta file

DH-Pahang.4.3.gff3

13 janv. 2025 - Source Data to study Genome assemblies of Musa wild banana ancestors and draw figures.

Unknown - 42,2 MB -

DH-Pahang annotation transfered with liftoff v1.6.3 to other assembies

DH-Pahang.gff3

13 janv. 2025 - Source Data to study Genome assemblies of Musa wild banana ancestors and draw figures.

Unknown - 63,3 MB -

M.a. ssp malaccensis reference annotation with liftoff v1.6.3 and used with jcvi v1.1.18 for orthologs gene and block identification

DYN104_Grande_Naine_1x.svg

13 janv. 2025 - Source Data to study Genome assemblies of Musa wild banana ancestors and draw figures.

SVG Image - 158,2 KB -

Ancestry painting of the 1x gamete contributing to Cavendish projected along DH-Pahang structure from Martin et al., 2023

DYN_2013-098_Mshia_Wa_Komba.svg

13 janv. 2025 - Source Data to study Genome assemblies of Musa wild banana ancestors and draw figures.

SVG Image - 196,5 KB -

Ancestry painting of the 2x gamete contributing to Cavendish projected along DH-Pahang structure from Martin et al., 2023

Ensete_glaucum.1.0_100000_count.MajR.png

13 janv. 2025 - Source Data to study Genome assemblies of Musa wild banana ancestors and draw figures.

PNG Image - 45,6 KB -

png file obtained from chromosome ancestry painting of E. glaucum

Ensete_glaucum.1.0_100000_count.MajR.tab

13 janv. 2025 - Source Data to study Genome assemblies of Musa wild banana ancestors and draw figures.

Tab-Separated Values - 96,0 KB -

Tabuled file with E. glaucum assembly origin painting to construct chromosome scale figures (6 columns: Name, Chr, start, end, origin, color)

Ensete_glaucum.1.0.fasta

13 janv. 2025 - Source Data to study Genome assemblies of Musa wild banana ancestors and draw figures.

Unknown - 466,9 MB -

E. glaucum assembly in multifasta file

Add Data

Share Dataverse

Link Dataverse

Reset Modifications