UMR AGAP Institut

Pour répondre aux grands enjeux de l'agriculture méditerranéenne et tropicale, l'unité AGAP Institut se donne comme ambition de mettre en synergie une grande diversité de compétences, d'approches et de ressources pour des plantes cultivées mieux adaptées à des agrosystèmes variés.
Les tutelles de l'UMR AGAP Institut sont le CIRAD, l'INRAE, l'institut Agro et l'Université de Montpellier.

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21 to 30 of 439 Results

README.md 9 sept. 2025 - Population genomics of African cultivated sorghum: vcf file and passeport and archaeological data Markdown Text - 7,7 KB - MD5: d550ecaaae9ac47ab30eb815e785aa5f
Dataset_S1.txt 7 août 2025 - Population genomics of African cultivated sorghum: vcf file and passeport and archaeological data Plain Text - 36,8 KB - MD5: 1652ada5ecd90f7887c7e7de392f1b36 Data List of the 210 sorghum accessions and their passport data
data_sorgho_210CoreColl.vcf 7 août 2025 - Population genomics of African cultivated sorghum: vcf file and passeport and archaeological data Virtual Contact File - 470,1 MB - MD5: d3c852978f171a272c85ab6400d5eb90 Data VCF file used in the study
Phenotypic data for 2727 triploid banana hybrids evaluated for 23 agro-morphological traits in Guadeloupe (2012-2017) and genoyping information for their 36 progenitors 16 mai 2025 Toniutti, Lucile, 2025, "Phenotypic data for 2727 triploid banana hybrids evaluated for 23 agro-morphological traits in Guadeloupe (2012-2017) and genoyping information for their 36 progenitors", https://doi.org/10.18167/DVN1/YSM8R7, CIRAD Dataverse, V1, UNF:6:sgEPzcbR6kQpBH8DBvJedg== [fileUNF] Data include: variant call format (VCF) for 36 parents of 2723 triploid banana hybrids genotyped for 125245 bi-allelic single nucleotide polymorphisms obtained using whole sequencing information raw phenotypic data for the 23 agro-morphological traits, along with pedigree informa...
ParentVcf_filt.vcf.gz 16 mai 2025 - Phenotypic data for 2727 triploid banana hybrids evaluated for 23 agro-morphological traits in Guadeloupe (2012-2017) and genoyping information for their 36 progenitors Gzip Archive - 19,4 MB - MD5: 0f59da1947304ce130b6070e92eb2896
phenotyping-vcf-correspondance.tab 16 mai 2025 - Phenotypic data for 2727 triploid banana hybrids evaluated for 23 agro-morphological traits in Guadeloupe (2012-2017) and genoyping information for their 36 progenitors Tabular Data - 1,2 KB - 2 Variables, 36 Observations - UNF:6:sgEPzcbR6kQpBH8DBvJedg== Correspondence table between the accession names in the phenotyping table and those in the VCF file
RawPhenotyping_2727hybrids_23traits.tab 16 mai 2025 - Phenotypic data for 2727 triploid banana hybrids evaluated for 23 agro-morphological traits in Guadeloupe (2012-2017) and genoyping information for their 36 progenitors Tab-Separated Values - 1,6 MB - MD5: e6df9e786495184d1cdd0cacae07d192 a table presenting raw data for 23 agro-morphological traits evaluated between 2011 and 2020 at CIRAD Neufchateau station, Capesterre Belle-Eau, Guadeloupe, French West Indies (16°05’N, 61°35’W), along with pedigree information for 2727 triploid banana hybrids
README.md 16 mai 2025 - Phenotypic data for 2727 triploid banana hybrids evaluated for 23 agro-morphological traits in Guadeloupe (2012-2017) and genoyping information for their 36 progenitors Markdown Text - 3,6 KB - MD5: 6a48b0c17742aed880b028c4ea62d0d3 README explaining the data structure
Seed morphometrics of white and black fonio seeds: passport data and morphometrics data 15 mai 2025 Causse, Sandrine, 2025, "Seed morphometrics of white and black fonio seeds: passport data and morphometrics data", https://doi.org/10.18167/DVN1/ZFZTWP, CIRAD Dataverse, V1, UNF:6:W0UA+sH4BpY5UPxN8G0tCg== [fileUNF] Plant genetic resources characterization is essential for their conservation and their use in both breeding strategies and adaptation to global change. In Western Africa, two small indigenous grain cereals are found, black and white fonio (Digitaria exilis and Digitaria iburua re...
morphometrics_data_seeds.tab 15 mai 2025 - Seed morphometrics of white and black fonio seeds: passport data and morphometrics data Tabular Data - 8,8 MB - 1 Variables, 27345 Observations - UNF:6:KzcAf+vdBVo0ZwCV0POJKQ== Morphometrics data for 98 accessions of D.exilis and 20 accessions of D. iburua

README.md

9 sept. 2025 - Population genomics of African cultivated sorghum: vcf file and passeport and archaeological data

Markdown Text - 7,7 KB -

Dataset_S1.txt

7 août 2025 - Population genomics of African cultivated sorghum: vcf file and passeport and archaeological data

Plain Text - 36,8 KB -

Data

List of the 210 sorghum accessions and their passport data

data_sorgho_210CoreColl.vcf

7 août 2025 - Population genomics of African cultivated sorghum: vcf file and passeport and archaeological data

Virtual Contact File - 470,1 MB -

Data

VCF file used in the study

Phenotypic data for 2727 triploid banana hybrids evaluated for 23 agro-morphological traits in Guadeloupe (2012-2017) and genoyping information for their 36 progenitors

16 mai 2025

Toniutti, Lucile, 2025, "Phenotypic data for 2727 triploid banana hybrids evaluated for 23 agro-morphological traits in Guadeloupe (2012-2017) and genoyping information for their 36 progenitors", https://doi.org/10.18167/DVN1/YSM8R7, CIRAD Dataverse, V1, UNF:6:sgEPzcbR6kQpBH8DBvJedg== [fileUNF]

Data include: variant call format (VCF) for 36 parents of 2723 triploid banana hybrids genotyped for 125245 bi-allelic single nucleotide polymorphisms obtained using whole sequencing information raw phenotypic data for the 23 agro-morphological traits, along with pedigree informa...

ParentVcf_filt.vcf.gz

16 mai 2025 - Phenotypic data for 2727 triploid banana hybrids evaluated for 23 agro-morphological traits in Guadeloupe (2012-2017) and genoyping information for their 36 progenitors

Gzip Archive - 19,4 MB -

phenotyping-vcf-correspondance.tab

16 mai 2025 - Phenotypic data for 2727 triploid banana hybrids evaluated for 23 agro-morphological traits in Guadeloupe (2012-2017) and genoyping information for their 36 progenitors

Tabular Data - 1,2 KB - 2 Variables, 36 Observations -

Correspondence table between the accession names in the phenotyping table and those in the VCF file

RawPhenotyping_2727hybrids_23traits.tab

16 mai 2025 - Phenotypic data for 2727 triploid banana hybrids evaluated for 23 agro-morphological traits in Guadeloupe (2012-2017) and genoyping information for their 36 progenitors

Tab-Separated Values - 1,6 MB -

a table presenting raw data for 23 agro-morphological traits evaluated between 2011 and 2020 at CIRAD Neufchateau station, Capesterre Belle-Eau, Guadeloupe, French West Indies (16°05’N, 61°35’W), along with pedigree information for 2727 triploid banana hybrids

README.md

16 mai 2025 - Phenotypic data for 2727 triploid banana hybrids evaluated for 23 agro-morphological traits in Guadeloupe (2012-2017) and genoyping information for their 36 progenitors

Markdown Text - 3,6 KB -

README explaining the data structure

Seed morphometrics of white and black fonio seeds: passport data and morphometrics data

15 mai 2025

Causse, Sandrine, 2025, "Seed morphometrics of white and black fonio seeds: passport data and morphometrics data", https://doi.org/10.18167/DVN1/ZFZTWP, CIRAD Dataverse, V1, UNF:6:W0UA+sH4BpY5UPxN8G0tCg== [fileUNF]

Plant genetic resources characterization is essential for their conservation and their use in both breeding strategies and adaptation to global change. In Western Africa, two small indigenous grain cereals are found, black and white fonio (Digitaria exilis and Digitaria iburua re...

morphometrics_data_seeds.tab

15 mai 2025 - Seed morphometrics of white and black fonio seeds: passport data and morphometrics data

Tabular Data - 8,8 MB - 1 Variables, 27345 Observations -

Morphometrics data for 98 accessions of D.exilis and 20 accessions of D. iburua

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