UMR AGAP Institut

Pour répondre aux grands enjeux de l'agriculture méditerranéenne et tropicale, l'unité AGAP Institut se donne comme ambition de mettre en synergie une grande diversité de compétences, d'approches et de ressources pour des plantes cultivées mieux adaptées à des agrosystèmes variés.
Les tutelles de l'UMR AGAP Institut sont le CIRAD, l'INRAE, l'institut Agro et l'Université de Montpellier.

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131 to 140 of 439 Results

MLP.py 7 janv. 2025 - SNP data and phenotypes for oil palm training and test sets, and associated script for genomic predictions with multi-layer perceptron Python Source Code - 12,1 KB - MD5: 0e439c33b654a3a8bc26aa938cd5a870 python script that implements genomic prediction with the multi-layer perceptron artificial neural network
README.txt 7 janv. 2025 - SNP data and phenotypes for oil palm training and test sets, and associated script for genomic predictions with multi-layer perceptron Plain Text - 903 B - MD5: 15a5ab43acaea68f965959c6d1f1a4f8 Files description
Xtr_PROD_SingleRecords.txt 7 janv. 2025 - SNP data and phenotypes for oil palm training and test sets, and associated script for genomic predictions with multi-layer perceptron Plain Text - 34,1 MB - MD5: 10e67c4092c84a0395ef6bc1881e03db SNP genotypes of the training set
Xval_PROD_SingleRecords.txt 7 janv. 2025 - SNP data and phenotypes for oil palm training and test sets, and associated script for genomic predictions with multi-layer perceptron Plain Text - 27,8 MB - MD5: 2c048e8dbd36d7676670b10b3d7160c7 SNP genotypes of the test set
Ytr_PROD_SingleRecords_normalized.tab 7 janv. 2025 - SNP data and phenotypes for oil palm training and test sets, and associated script for genomic predictions with multi-layer perceptron Tabular Data - 25,3 KB - 1 Variables, 688 Observations - UNF:6:pBLqToykjsSCy6YlRkqVFg== normalized phenotypes of the training set
Yval_PROD_SingleRecords_normalized.tab 7 janv. 2025 - SNP data and phenotypes for oil palm training and test sets, and associated script for genomic predictions with multi-layer perceptron Tabular Data - 18,1 KB - 1 Variables, 492 Observations - UNF:6:hi9zasl6s227fU6F97Buhg== normalized phenotypes of the test set
Genotyping and phenotyping data of 250 individuals of the Fleur11 x IpaCor AB-QTL population phenotyped during three consecutive years (2020, 2021 and 2022) at Nioro research Station, Senegal 19 déc. 2024 Fonceka, Daniel, 2024, "Genotyping and phenotyping data of 250 individuals of the Fleur11 x IpaCor AB-QTL population phenotyped during three consecutive years (2020, 2021 and 2022) at Nioro research Station, Senegal", https://doi.org/10.18167/DVN1/8LYUWO, CIRAD Dataverse, V1 This dataset relates to the paper "Mapping QTLs for early leafspot resistance and yield component traits using an interspecific AB-QTL population in peanut" published in 2024 in Frontiers in Plant Science. It gathers three years of phenotyping data collected during the rainy seas...
Data_Genotype_Phenotype_Gomis_et_al_2024.csv 19 déc. 2024 - Genotyping and phenotyping data of 250 individuals of the Fleur11 x IpaCor AB-QTL population phenotyped during three consecutive years (2020, 2021 and 2022) at Nioro research Station, Senegal Comma Separated Values - 1,2 MB - MD5: 434359b615123a3c26558bbaa4564d2d
readme.txt 19 déc. 2024 - Genotyping and phenotyping data of 250 individuals of the Fleur11 x IpaCor AB-QTL population phenotyped during three consecutive years (2020, 2021 and 2022) at Nioro research Station, Senegal Plain Text - 2,7 KB - MD5: 3b1b325be63b52220e3a3a06e4096d7f
ADH3_mafftaligned.fas 12 nov. 2024 - Source Data to study Genome assemblies of Musa wild banana ancestors and draw figures. Unknown - 10,9 KB - MD5: 025f2e20c1c6af8c4939e74470547e17 ADH gene alignment in multifasta

MLP.py

7 janv. 2025 - SNP data and phenotypes for oil palm training and test sets, and associated script for genomic predictions with multi-layer perceptron

Python Source Code - 12,1 KB -

python script that implements genomic prediction with the multi-layer perceptron artificial neural network

README.txt

7 janv. 2025 - SNP data and phenotypes for oil palm training and test sets, and associated script for genomic predictions with multi-layer perceptron

Plain Text - 903 B -

Files description

Xtr_PROD_SingleRecords.txt

7 janv. 2025 - SNP data and phenotypes for oil palm training and test sets, and associated script for genomic predictions with multi-layer perceptron

Plain Text - 34,1 MB -

SNP genotypes of the training set

Xval_PROD_SingleRecords.txt

7 janv. 2025 - SNP data and phenotypes for oil palm training and test sets, and associated script for genomic predictions with multi-layer perceptron

Plain Text - 27,8 MB -

SNP genotypes of the test set

Ytr_PROD_SingleRecords_normalized.tab

7 janv. 2025 - SNP data and phenotypes for oil palm training and test sets, and associated script for genomic predictions with multi-layer perceptron

Tabular Data - 25,3 KB - 1 Variables, 688 Observations -

normalized phenotypes of the training set

Yval_PROD_SingleRecords_normalized.tab

7 janv. 2025 - SNP data and phenotypes for oil palm training and test sets, and associated script for genomic predictions with multi-layer perceptron

Tabular Data - 18,1 KB - 1 Variables, 492 Observations -

normalized phenotypes of the test set

Genotyping and phenotyping data of 250 individuals of the Fleur11 x IpaCor AB-QTL population phenotyped during three consecutive years (2020, 2021 and 2022) at Nioro research Station, Senegal

19 déc. 2024

Fonceka, Daniel, 2024, "Genotyping and phenotyping data of 250 individuals of the Fleur11 x IpaCor AB-QTL population phenotyped during three consecutive years (2020, 2021 and 2022) at Nioro research Station, Senegal", https://doi.org/10.18167/DVN1/8LYUWO, CIRAD Dataverse, V1

This dataset relates to the paper "Mapping QTLs for early leafspot resistance and yield component traits using an interspecific AB-QTL population in peanut" published in 2024 in Frontiers in Plant Science. It gathers three years of phenotyping data collected during the rainy seas...

Data_Genotype_Phenotype_Gomis_et_al_2024.csv

19 déc. 2024 - Genotyping and phenotyping data of 250 individuals of the Fleur11 x IpaCor AB-QTL population phenotyped during three consecutive years (2020, 2021 and 2022) at Nioro research Station, Senegal

Comma Separated Values - 1,2 MB -

readme.txt

Plain Text - 2,7 KB -

ADH3_mafftaligned.fas

12 nov. 2024 - Source Data to study Genome assemblies of Musa wild banana ancestors and draw figures.

Unknown - 10,9 KB -

ADH gene alignment in multifasta

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