UMR AGAP Institut

Pour répondre aux grands enjeux de l'agriculture méditerranéenne et tropicale, l'unité AGAP Institut se donne comme ambition de mettre en synergie une grande diversité de compétences, d'approches et de ressources pour des plantes cultivées mieux adaptées à des agrosystèmes variés.
Les tutelles de l'UMR AGAP Institut sont le CIRAD, l'INRAE, l'institut Agro et l'Université de Montpellier.

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111 to 120 of 439 Results

MaiaOa.gff3 13 janv. 2025 - Source Data to study Genome assemblies of Musa wild banana ancestors and draw figures. Unknown - 61,7 MB - MD5: 4041bc1f1eb087925041df71b6ed06de M.a. ssp zebrina annotation with liftoff v1.6.3 and used with jcvi v1.1.18 for orthologs gene and block identification
MSchizo.1.0.fasta 13 janv. 2025 - Source Data to study Genome assemblies of Musa wild banana ancestors and draw figures. Unknown - 509,3 MB - MD5: 26051d4987a1b8b7fbe6c89978504fb5 M.a. ssp malaccensis reference assembly in multifasta file for dot-plot comparison and mapping
MSchizo.2.0_100000_count.MajR.png 13 janv. 2025 - Source Data to study Genome assemblies of Musa wild banana ancestors and draw figures. PNG Image - 34,5 KB - MD5: d16706747c5e27edb27a42d2c78f3ea8 png file obtained from chromosome ancestry painting of M. schizocarpa
MSchizo.2.0_100000_count.MajR.tab 13 janv. 2025 - Source Data to study Genome assemblies of Musa wild banana ancestors and draw figures. Tab-Separated Values - 261,8 KB - MD5: 7fc85ef6fbe0a0246201a06c461fe4b0 Tabulated file with M. schizocarpa assembly origin painting to construct chromosome scale figures (6 columns: Name, Chr, start, end, origin, color)
MSchizo.2.0.fasta 13 janv. 2025 - Source Data to study Genome assemblies of Musa wild banana ancestors and draw figures. Unknown - 518,0 MB - MD5: fd4afffaf7c65454a9190d13423e7dcc M. schizocarpa assembly in multifasta file
MSchizo.gff3 13 janv. 2025 - Source Data to study Genome assemblies of Musa wild banana ancestors and draw figures. Unknown - 60,9 MB - MD5: 3e8a6838ec1aab3140628268ae1eb760 M. schizocarpa annotation with liftoff v1.6.3 and used with jcvi v1.1.18 for orthologs gene and block identification
Musa_balbisiana.1.1_100000_count.MajR.png 13 janv. 2025 - Source Data to study Genome assemblies of Musa wild banana ancestors and draw figures. PNG Image - 31,8 KB - MD5: 0deb72ba2815a91f9e2f533c9346a809 png file obtained from chromosome ancestry painting of M. balbisiana
Musa_balbisiana.1.1_100000_count.MajR.tab 13 janv. 2025 - Source Data to study Genome assemblies of Musa wild banana ancestors and draw figures. Tab-Separated Values - 202,3 KB - MD5: 9464a1017ecc181ff56faafc16a41738 Tabulated file with M. balbisiana assembly origin painting to construct chromosome scale figures (6 columns: Name, Chr, start, end, origin, color)
Musa_balbisiana.1.1.fasta 13 janv. 2025 - Source Data to study Genome assemblies of Musa wild banana ancestors and draw figures. Unknown - 443,3 MB - MD5: f2fa75d7a085ab33e448be7289ea7950 M. balbisiana assembly in multifasta file
Musa_balbisiana.gff3 13 janv. 2025 - Source Data to study Genome assemblies of Musa wild banana ancestors and draw figures. Unknown - 59,4 MB - MD5: b19551536e92ede6ee2864948e3c1fe9 M. balbisiana annotation with liftoff v1.6.3 and used with jcvi v1.1.18 for orthologs gene and block identification

MaiaOa.gff3

13 janv. 2025 - Source Data to study Genome assemblies of Musa wild banana ancestors and draw figures.

Unknown - 61,7 MB -

M.a. ssp zebrina annotation with liftoff v1.6.3 and used with jcvi v1.1.18 for orthologs gene and block identification

MSchizo.1.0.fasta

13 janv. 2025 - Source Data to study Genome assemblies of Musa wild banana ancestors and draw figures.

Unknown - 509,3 MB -

M.a. ssp malaccensis reference assembly in multifasta file for dot-plot comparison and mapping

MSchizo.2.0_100000_count.MajR.png

13 janv. 2025 - Source Data to study Genome assemblies of Musa wild banana ancestors and draw figures.

PNG Image - 34,5 KB -

png file obtained from chromosome ancestry painting of M. schizocarpa

MSchizo.2.0_100000_count.MajR.tab

13 janv. 2025 - Source Data to study Genome assemblies of Musa wild banana ancestors and draw figures.

Tab-Separated Values - 261,8 KB -

Tabulated file with M. schizocarpa assembly origin painting to construct chromosome scale figures (6 columns: Name, Chr, start, end, origin, color)

MSchizo.2.0.fasta

13 janv. 2025 - Source Data to study Genome assemblies of Musa wild banana ancestors and draw figures.

Unknown - 518,0 MB -

M. schizocarpa assembly in multifasta file

MSchizo.gff3

13 janv. 2025 - Source Data to study Genome assemblies of Musa wild banana ancestors and draw figures.

Unknown - 60,9 MB -

M. schizocarpa annotation with liftoff v1.6.3 and used with jcvi v1.1.18 for orthologs gene and block identification

Musa_balbisiana.1.1_100000_count.MajR.png

13 janv. 2025 - Source Data to study Genome assemblies of Musa wild banana ancestors and draw figures.

PNG Image - 31,8 KB -

png file obtained from chromosome ancestry painting of M. balbisiana

Musa_balbisiana.1.1_100000_count.MajR.tab

13 janv. 2025 - Source Data to study Genome assemblies of Musa wild banana ancestors and draw figures.

Tab-Separated Values - 202,3 KB -

Tabulated file with M. balbisiana assembly origin painting to construct chromosome scale figures (6 columns: Name, Chr, start, end, origin, color)

Musa_balbisiana.1.1.fasta

13 janv. 2025 - Source Data to study Genome assemblies of Musa wild banana ancestors and draw figures.

Unknown - 443,3 MB -

M. balbisiana assembly in multifasta file

Musa_balbisiana.gff3

13 janv. 2025 - Source Data to study Genome assemblies of Musa wild banana ancestors and draw figures.

Unknown - 59,4 MB -

M. balbisiana annotation with liftoff v1.6.3 and used with jcvi v1.1.18 for orthologs gene and block identification

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