UMR AGAP Institut

Pour répondre aux grands enjeux de l'agriculture méditerranéenne et tropicale, l'unité AGAP Institut se donne comme ambition de mettre en synergie une grande diversité de compétences, d'approches et de ressources pour des plantes cultivées mieux adaptées à des agrosystèmes variés.
Les tutelles de l'UMR AGAP Institut sont le CIRAD, l'INRAE, l'institut Agro et l'Université de Montpellier.

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101 to 110 of 374 Results

MAH2.fasta 13 janv. 2025 - Source Data to study Genome assemblies of Musa wild banana ancestors and draw figures. Unknown - 454,0 MB - MD5: 8dfd0851571fc38555b5c22341855815 M.a. ssp malaccensis h2 assembly in multifasta file
MAH2.gff3 13 janv. 2025 - Source Data to study Genome assemblies of Musa wild banana ancestors and draw figures. Unknown - 61,4 MB - MD5: 3a83352a7e9d81b3452a269d8056120c M.a. ssp malaccensis h2 annotation with liftoff v1.6.3 and used with jcvi v1.1.18 for orthologs gene and block identification
MaiaOa.2.0_100000_count.MajR.png 13 janv. 2025 - Source Data to study Genome assemblies of Musa wild banana ancestors and draw figures. PNG Image - 39,3 KB - MD5: 26f065cda828eaa60d370ca195ea7412 png file obtained from chromosome ancestry painting of M.a. ssp zebrina
MaiaOa.2.0_100000_count.MajR.tab 13 janv. 2025 - Source Data to study Genome assemblies of Musa wild banana ancestors and draw figures. Tab-Separated Values - 262,3 KB - MD5: 5e89ba0771084d15d8a9bf63be75b0c8 Tabulated file with M.a. ssp zebrina assembly origin painting to construct chromosome scale figures (6 columns: Name, Chr, start, end, origin, color)
MaiaOa.2.0.fasta 13 janv. 2025 - Source Data to study Genome assemblies of Musa wild banana ancestors and draw figures. Unknown - 534,2 MB - MD5: bd4dc201155a8fb97eda9d57a51cd97f M.a. ssp zebrina assembly in multifasta file
MaiaOa.gff3 13 janv. 2025 - Source Data to study Genome assemblies of Musa wild banana ancestors and draw figures. Unknown - 61,7 MB - MD5: 4041bc1f1eb087925041df71b6ed06de M.a. ssp zebrina annotation with liftoff v1.6.3 and used with jcvi v1.1.18 for orthologs gene and block identification
MSchizo.1.0.fasta 13 janv. 2025 - Source Data to study Genome assemblies of Musa wild banana ancestors and draw figures. Unknown - 509,3 MB - MD5: 26051d4987a1b8b7fbe6c89978504fb5 M.a. ssp malaccensis reference assembly in multifasta file for dot-plot comparison and mapping
MSchizo.2.0_100000_count.MajR.png 13 janv. 2025 - Source Data to study Genome assemblies of Musa wild banana ancestors and draw figures. PNG Image - 34,5 KB - MD5: d16706747c5e27edb27a42d2c78f3ea8 png file obtained from chromosome ancestry painting of M. schizocarpa
MSchizo.2.0_100000_count.MajR.tab 13 janv. 2025 - Source Data to study Genome assemblies of Musa wild banana ancestors and draw figures. Tab-Separated Values - 261,8 KB - MD5: 7fc85ef6fbe0a0246201a06c461fe4b0 Tabulated file with M. schizocarpa assembly origin painting to construct chromosome scale figures (6 columns: Name, Chr, start, end, origin, color)
MSchizo.2.0.fasta 13 janv. 2025 - Source Data to study Genome assemblies of Musa wild banana ancestors and draw figures. Unknown - 518,0 MB - MD5: fd4afffaf7c65454a9190d13423e7dcc M. schizocarpa assembly in multifasta file

MAH2.fasta

13 janv. 2025 - Source Data to study Genome assemblies of Musa wild banana ancestors and draw figures.

Unknown - 454,0 MB -

M.a. ssp malaccensis h2 assembly in multifasta file

MAH2.gff3

13 janv. 2025 - Source Data to study Genome assemblies of Musa wild banana ancestors and draw figures.

Unknown - 61,4 MB -

M.a. ssp malaccensis h2 annotation with liftoff v1.6.3 and used with jcvi v1.1.18 for orthologs gene and block identification

MaiaOa.2.0_100000_count.MajR.png

13 janv. 2025 - Source Data to study Genome assemblies of Musa wild banana ancestors and draw figures.

PNG Image - 39,3 KB -

png file obtained from chromosome ancestry painting of M.a. ssp zebrina

MaiaOa.2.0_100000_count.MajR.tab

13 janv. 2025 - Source Data to study Genome assemblies of Musa wild banana ancestors and draw figures.

Tab-Separated Values - 262,3 KB -

Tabulated file with M.a. ssp zebrina assembly origin painting to construct chromosome scale figures (6 columns: Name, Chr, start, end, origin, color)

MaiaOa.2.0.fasta

13 janv. 2025 - Source Data to study Genome assemblies of Musa wild banana ancestors and draw figures.

Unknown - 534,2 MB -

M.a. ssp zebrina assembly in multifasta file

MaiaOa.gff3

13 janv. 2025 - Source Data to study Genome assemblies of Musa wild banana ancestors and draw figures.

Unknown - 61,7 MB -

M.a. ssp zebrina annotation with liftoff v1.6.3 and used with jcvi v1.1.18 for orthologs gene and block identification

MSchizo.1.0.fasta

13 janv. 2025 - Source Data to study Genome assemblies of Musa wild banana ancestors and draw figures.

Unknown - 509,3 MB -

M.a. ssp malaccensis reference assembly in multifasta file for dot-plot comparison and mapping

MSchizo.2.0_100000_count.MajR.png

13 janv. 2025 - Source Data to study Genome assemblies of Musa wild banana ancestors and draw figures.

PNG Image - 34,5 KB -

png file obtained from chromosome ancestry painting of M. schizocarpa

MSchizo.2.0_100000_count.MajR.tab

13 janv. 2025 - Source Data to study Genome assemblies of Musa wild banana ancestors and draw figures.

Tab-Separated Values - 261,8 KB -

Tabulated file with M. schizocarpa assembly origin painting to construct chromosome scale figures (6 columns: Name, Chr, start, end, origin, color)

MSchizo.2.0.fasta

13 janv. 2025 - Source Data to study Genome assemblies of Musa wild banana ancestors and draw figures.

Unknown - 518,0 MB -

M. schizocarpa assembly in multifasta file

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