UMR AGAP Institut

Pour répondre aux grands enjeux de l'agriculture méditerranéenne et tropicale, l'unité AGAP Institut se donne comme ambition de mettre en synergie une grande diversité de compétences, d'approches et de ressources pour des plantes cultivées mieux adaptées à des agrosystèmes variés.
Les tutelles de l'UMR AGAP Institut sont le CIRAD, l'INRAE, l'institut Agro et l'Université de Montpellier.

Featured Dataverses

In order to use this feature you must have at least one published dataverse.

Publish Dataverse

Are you sure you want to publish your dataverse? Once you do so it must remain published.

Publish Dataverse

This dataverse cannot be published because the dataverse it is in has not been published.

Delete Dataverse

Are you sure you want to delete your dataverse? You cannot undelete this dataverse.

1 to 10 of 243 Results

ADH3_mafftaligned.fas 12 nov. 2024 - Transposable element datasets and gene phylogeny to study Genome assemblies of Musa wild banana ancestors Unknown - 10,9 KB - MD5: 025f2e20c1c6af8c4939e74470547e17
EDTA_repeats_db.fasta 12 nov. 2024 - Transposable element datasets and gene phylogeny to study Genome assemblies of Musa wild banana ancestors Unknown - 45,1 MB - MD5: d13adae1b118430ed123210359566edf
GBSS1_mafftaligned.fas 12 nov. 2024 - Transposable element datasets and gene phylogeny to study Genome assemblies of Musa wild banana ancestors Unknown - 13,3 KB - MD5: ab0dff54b3ab36d9d50079185b48566e
LTR_db.fasta 12 nov. 2024 - Transposable element datasets and gene phylogeny to study Genome assemblies of Musa wild banana ancestors Unknown - 45,2 MB - MD5: 35108f72814b7a4c0f5eabd0f3e15c89
Readme.txt 12 nov. 2024 - Transposable element datasets and gene phylogeny to study Genome assemblies of Musa wild banana ancestors Plain Text - 534 B - MD5: 8546f867411e14a5ee7ed829127be946
Genotyping_1129hybrids_200Ksnps.vcf.gz 8 nov. 2024 - Genotypic data, phenotypic data and GWAS summary statistics for 1129 triploid banana hybrids evaluated for 24 agro-morphological traits in Guadeloupe (2011-2016) and genotyped-by-sequencing for 200K single-nucleotide-polymorphism markers Gzip Archive - 759,2 MB - MD5: 846dfdb752f869fae1bf874e7e65dca4 Variant Call Format (VCF) for 1129 triploid banana hybrids genotyped for 200K bi-allelic single nucleotide polymorphisms obtained by genotyping-by-sequencing
GWAS_summary_stats_Kc_model.tar.gz 8 nov. 2024 - Genotypic data, phenotypic data and GWAS summary statistics for 1129 triploid banana hybrids evaluated for 24 agro-morphological traits in Guadeloupe (2011-2016) and genotyped-by-sequencing for 200K single-nucleotide-polymorphism markers Gzip Archive - 897,4 MB - MD5: ff576752f521995903dc6cbc31d9483c Archive (TAR.GZ) of genome-wide association study summary statistics obtained from the Kc model for 24 agro-morphological traits: pseudostem height, pseudostem girth, robustness index, number of leaves at flowering, number of leaves at harvesting, leaf blade length, leaf blade wi...
GWAS_summary_stats_K_model.tar.gz 8 nov. 2024 - Genotypic data, phenotypic data and GWAS summary statistics for 1129 triploid banana hybrids evaluated for 24 agro-morphological traits in Guadeloupe (2011-2016) and genotyped-by-sequencing for 200K single-nucleotide-polymorphism markers Gzip Archive - 897,4 MB - MD5: a98183f275761145bcfdf24a19ec79b5 Archive (TAR.GZ) of genome-wide association study summary statistics obtained from the standard K model for 24 agro-morphological traits: pseudostem height, pseudostem girth, robustness index, number of leaves at flowering, number of leaves at harvesting, leaf blade length, leaf...
Phenotyping_2727hybrids_24traits.tsv 8 nov. 2024 - Genotypic data, phenotypic data and GWAS summary statistics for 1129 triploid banana hybrids evaluated for 24 agro-morphological traits in Guadeloupe (2011-2016) and genotyped-by-sequencing for 200K single-nucleotide-polymorphism markers Tab-Separated Values - 1,3 MB - MD5: 560e948cdcee4b8150247a6e832f5bcd Table (TSV) presenting best linear unbiased prediction of genotypic effects for 24 agro-morphological traits along with pedigree information for 2727 triploid banana hybrids, including four checks and 1464 hybrids which were genotyped-by-sequencing. Among the 1464 hybrids genotyp...
README.md 8 nov. 2024 - Genotypic data, phenotypic data and GWAS summary statistics for 1129 triploid banana hybrids evaluated for 24 agro-morphological traits in Guadeloupe (2011-2016) and genotyped-by-sequencing for 200K single-nucleotide-polymorphism markers Markdown Text - 5,4 KB - MD5: ccb11091c22ba7bb7bd58d1c435d1168 Read-me

ADH3_mafftaligned.fas

12 nov. 2024 - Transposable element datasets and gene phylogeny to study Genome assemblies of Musa wild banana ancestors

Unknown - 10,9 KB -

EDTA_repeats_db.fasta

12 nov. 2024 - Transposable element datasets and gene phylogeny to study Genome assemblies of Musa wild banana ancestors

Unknown - 45,1 MB -

GBSS1_mafftaligned.fas

12 nov. 2024 - Transposable element datasets and gene phylogeny to study Genome assemblies of Musa wild banana ancestors

Unknown - 13,3 KB -

LTR_db.fasta

12 nov. 2024 - Transposable element datasets and gene phylogeny to study Genome assemblies of Musa wild banana ancestors

Unknown - 45,2 MB -

Readme.txt

12 nov. 2024 - Transposable element datasets and gene phylogeny to study Genome assemblies of Musa wild banana ancestors

Plain Text - 534 B -

Genotyping_1129hybrids_200Ksnps.vcf.gz

8 nov. 2024 - Genotypic data, phenotypic data and GWAS summary statistics for 1129 triploid banana hybrids evaluated for 24 agro-morphological traits in Guadeloupe (2011-2016) and genotyped-by-sequencing for 200K single-nucleotide-polymorphism markers

Gzip Archive - 759,2 MB -

Variant Call Format (VCF) for 1129 triploid banana hybrids genotyped for 200K bi-allelic single nucleotide polymorphisms obtained by genotyping-by-sequencing

GWAS_summary_stats_Kc_model.tar.gz

Gzip Archive - 897,4 MB -

Archive (TAR.GZ) of genome-wide association study summary statistics obtained from the Kc model for 24 agro-morphological traits: pseudostem height, pseudostem girth, robustness index, number of leaves at flowering, number of leaves at harvesting, leaf blade length, leaf blade wi...

GWAS_summary_stats_K_model.tar.gz

Gzip Archive - 897,4 MB -

Archive (TAR.GZ) of genome-wide association study summary statistics obtained from the standard K model for 24 agro-morphological traits: pseudostem height, pseudostem girth, robustness index, number of leaves at flowering, number of leaves at harvesting, leaf blade length, leaf...

Phenotyping_2727hybrids_24traits.tsv

Tab-Separated Values - 1,3 MB -

Table (TSV) presenting best linear unbiased prediction of genotypic effects for 24 agro-morphological traits along with pedigree information for 2727 triploid banana hybrids, including four checks and 1464 hybrids which were genotyped-by-sequencing. Among the 1464 hybrids genotyp...

README.md

Markdown Text - 5,4 KB -

Read-me

Add Data

Share Dataverse

Link Dataverse

Reset Modifications