Genetique_Innovation

L’équipe travaille principalement sur deux plantes cibles, riz et sorgho, mais aussi sur plusieurs espèces à racines et tubercules et eucalyptus. Ses recherches portent sur les méthodologies de sélection pour l’innovation variétale et la caractérisation de l’agrobiodiversité.
The team works mainly on two target plants, rice and sorghum, but also on several root and tuber species and eucalyptus. His research focuses on selection methodologies for varietal innovation and agrobiodiversity characterization.

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1 to 10 of 48 Results

Performance of phenomic selection in rice: effects of population size and genotype environment interactions on predictive ability 8 août 2024 De Verdal, Hugues, 2024, "Performance of phenomic selection in rice: effects of population size and genotype environment interactions on predictive ability", https://doi.org/10.18167/DVN1/JN5I8K, CIRAD Dataverse, V1 Les données présentes dans ce dataset correspondent aux données de phénotypage (160 variétés issues d'un panel de diversité mesurés pour 30 caractères différents essentiellement liés à la fixation d'azote), de génotypage (environ 30k SNP) et aux BLUPs des NIRS (faits sur grain et...
BLUP_spectres_full.RData 8 août 2024 - Performance of phenomic selection in rice: effects of population size and genotype environment interactions on predictive ability R Data - 1,1 GB - MD5: 1c48af60ce9da0da23a9d32d6fd9dd07 BLUP des spectres de grain et paille avec différents pré-traitements, pour les 2 années et les 2 traitements azotés
genofile_220427.txt 8 août 2024 - Performance of phenomic selection in rice: effects of population size and genotype environment interactions on predictive ability Plain Text - 28,1 MB - MD5: f1512d12bd96d25e994b3e1eff48ed15 genotypic file (190 génotypes x 38390 SNP)
pheno_blue_2015_HN_220906.txt 8 août 2024 - Performance of phenomic selection in rice: effects of population size and genotype environment interactions on predictive ability Plain Text - 66,9 KB - MD5: 2fb69404178ac29701fd6b09c351e9e0 BLUE of the phenotypes measured in 2015 with high nitrogen treatment.
pheno_blue_2015_LN_220906.txt 8 août 2024 - Performance of phenomic selection in rice: effects of population size and genotype environment interactions on predictive ability Plain Text - 73,2 KB - MD5: 9da0d811fa4616a5a96ef6da327c0ad3 BLUE of the phenotypes measured in 2015 with low nitrogen treatment.
pheno_blue_2016_HN_220906.txt 8 août 2024 - Performance of phenomic selection in rice: effects of population size and genotype environment interactions on predictive ability Plain Text - 76,3 KB - MD5: b003f0dc7376eacbf505fbe28a2b14a2 BLUE of the phenotypes measured in 2016 with high nitrogen treatment.
pheno_blue_2016_LN_220906.txt 8 août 2024 - Performance of phenomic selection in rice: effects of population size and genotype environment interactions on predictive ability Plain Text - 76,3 KB - MD5: 781f5894f8025272255a5a3ce0bcab56 BLUE of the phenotypes measured in 2016 with low nitrogen treatment.
README.txt 8 août 2024 - Performance of phenomic selection in rice: effects of population size and genotype environment interactions on predictive ability Plain Text - 2,4 KB - MD5: 9ddb3c9fda3dfdc12796bb6c0d4b0ee1 Explanation of the files and phenotypes measured
Genomic prediction in upland rice for aluminum tolerance in Latin America 4 juil. 2024 Grenier, Cecile; Bartholomé, Jérôme; Frouin, Julien, 2024, "Genomic prediction in upland rice for aluminum tolerance in Latin America", https://doi.org/10.18167/DVN1/HSIM8E, CIRAD Dataverse, V1, UNF:6:PIj0NVaZat5YRPPipI0HJg== [fileUNF] This data set contains a phenotypic information collected on a population of 334 S0:4 families extracted from synthetic population managed through recurrent selection and phenotyped in Colombia in 2020. The traits were recorded in two soil conditions (ALU: the naturally aluminum...
Omicas_GP_BLUEs.tab 4 juil. 2024 - Genomic prediction in upland rice for aluminum tolerance in Latin America Tabular Data - 44,3 KB - 7 Variables, 680 Observations - UNF:6:VeJGONx/u9PRGF1gUydOAw== Adjusted means (BLUEs), for the 334 S0:4 families, considering days to flower (FL), plant height (PH), grain yield (YLD) and grain zinc concentration (ZN)

Performance of phenomic selection in rice: effects of population size and genotype environment interactions on predictive ability

8 août 2024

De Verdal, Hugues, 2024, "Performance of phenomic selection in rice: effects of population size and genotype environment interactions on predictive ability", https://doi.org/10.18167/DVN1/JN5I8K, CIRAD Dataverse, V1

Les données présentes dans ce dataset correspondent aux données de phénotypage (160 variétés issues d'un panel de diversité mesurés pour 30 caractères différents essentiellement liés à la fixation d'azote), de génotypage (environ 30k SNP) et aux BLUPs des NIRS (faits sur grain et...

BLUP_spectres_full.RData

8 août 2024 - Performance of phenomic selection in rice: effects of population size and genotype environment interactions on predictive ability

R Data - 1,1 GB -

BLUP des spectres de grain et paille avec différents pré-traitements, pour les 2 années et les 2 traitements azotés

genofile_220427.txt

8 août 2024 - Performance of phenomic selection in rice: effects of population size and genotype environment interactions on predictive ability

Plain Text - 28,1 MB -

genotypic file (190 génotypes x 38390 SNP)

pheno_blue_2015_HN_220906.txt

8 août 2024 - Performance of phenomic selection in rice: effects of population size and genotype environment interactions on predictive ability

Plain Text - 66,9 KB -

BLUE of the phenotypes measured in 2015 with high nitrogen treatment.

pheno_blue_2015_LN_220906.txt

8 août 2024 - Performance of phenomic selection in rice: effects of population size and genotype environment interactions on predictive ability

Plain Text - 73,2 KB -

BLUE of the phenotypes measured in 2015 with low nitrogen treatment.

pheno_blue_2016_HN_220906.txt

8 août 2024 - Performance of phenomic selection in rice: effects of population size and genotype environment interactions on predictive ability

Plain Text - 76,3 KB -

BLUE of the phenotypes measured in 2016 with high nitrogen treatment.

pheno_blue_2016_LN_220906.txt

8 août 2024 - Performance of phenomic selection in rice: effects of population size and genotype environment interactions on predictive ability

Plain Text - 76,3 KB -

BLUE of the phenotypes measured in 2016 with low nitrogen treatment.

README.txt

8 août 2024 - Performance of phenomic selection in rice: effects of population size and genotype environment interactions on predictive ability

Plain Text - 2,4 KB -

Explanation of the files and phenotypes measured

Genomic prediction in upland rice for aluminum tolerance in Latin America

4 juil. 2024

Grenier, Cecile; Bartholomé, Jérôme; Frouin, Julien, 2024, "Genomic prediction in upland rice for aluminum tolerance in Latin America", https://doi.org/10.18167/DVN1/HSIM8E, CIRAD Dataverse, V1, UNF:6:PIj0NVaZat5YRPPipI0HJg== [fileUNF]

This data set contains a phenotypic information collected on a population of 334 S0:4 families extracted from synthetic population managed through recurrent selection and phenotyped in Colombia in 2020. The traits were recorded in two soil conditions (ALU: the naturally aluminum...

Omicas_GP_BLUEs.tab

4 juil. 2024 - Genomic prediction in upland rice for aluminum tolerance in Latin America

Tabular Data - 44,3 KB - 7 Variables, 680 Observations -

Adjusted means (BLUEs), for the 334 S0:4 families, considering days to flower (FL), plant height (PH), grain yield (YLD) and grain zinc concentration (ZN)

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