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4-BddStructure.doc
15 janv. 2020 - Démarche qualité AMAP 2017
MS Word - 37,5 KB - MD5: c84ed0b4a8f34d752c7a890a08580371
4-DicoBdd.doc
15 janv. 2020 - Démarche qualité AMAP 2017
MS Word - 53,0 KB - MD5: 1ad09116133f469724eee3e53167385a
4-EvalData.doc
15 janv. 2020 - Démarche qualité AMAP 2017
MS Word - 58,0 KB - MD5: 70721caf905a20ec9dd52b06922170d2
ProjetQualitéBdd.tar.gz
15 janv. 2020 - Démarche qualité AMAP 2017
Gzip Archive - 646,1 KB - MD5: 03532e8606fb5b77adaa0893f538fb18
Documentation
Fichiers pour mettre en place une gestion de la création des bases de données par la qualité
Original data for "Chapuis et al., 2020. A young age of subspecific divergence in the desert locust Schistocerca gregaria inferred by ABC Random Forest. Molecular Ecology, 29(23): 4542-4558."
Original data for "Chapuis et al., 2020. A young age of subspecific divergence in the desert locust Schistocerca gregaria inferred by ABC Random Forest. Molecular Ecology, 29(23): 4542-4558."
14 janv. 2020 - UMR CBGP
CHAPUIS, Marie-Pierre; RAYNAL, Louis; PLANTAMP, Christophe; MEYNARD, Christine N.; BLONDIN, Laurence; MARIN, Jean-Michel; ESTOUP, Arnaud, 2020, "Original data for "Chapuis et al., 2020. A young age of subspecific divergence in the desert locust Schistocerca gregaria inferred by ABC Random Forest. Molecular Ecology, 29(23): 4542-4558."", https://doi.org/10.18167/DVN1/ZNSKGK, CIRAD Dataverse, V1
Microsatellite genotypic data and R scripts for ABC-RF analyses
Desert_Locust_Microsatellite_Dataset.txt
14 janv. 2020 - Original data for "Chapuis et al., 2020. A young age of subspecific divergence in the desert locust Schistocerca gregaria inferred by ABC Random Forest. Molecular Ecology, 29(23): 4542-4558."
Plain Text - 28,9 KB - MD5: 30a992a8f04ec623ca3e861d93b160dd
Data
Multilocus genotypes (23 microsatellites) of the 90 S. g. flaviventris individuals and the 80 S. g. gregaria individuals used in this study.
DivergenceTimeEstimation_ABCRF.R
14 janv. 2020 - Original data for "Chapuis et al., 2020. A young age of subspecific divergence in the desert locust Schistocerca gregaria inferred by ABC Random Forest. Molecular Ecology, 29(23): 4542-4558."
R Syntax - 4,7 KB - MD5: 3e7b54ef98562c28f976d90d3c5bf61e
Code
R script to run a single ABC-RF parameter estimation analysis using datasets simulated with the package DIYABC v2.1.0.
header_model_choice.txt
14 janv. 2020 - Original data for "Chapuis et al., 2020. A young age of subspecific divergence in the desert locust Schistocerca gregaria inferred by ABC Random Forest. Molecular Ecology, 29(23): 4542-4558."
Plain Text - 4,0 KB - MD5: 29073f68b63bf7ce92936fe386e12f28
Data
Header of the training dataset for model choice generated by the DIYABC v2.1.0 package (also called the reference table)
header_parameter_estimation.txt
14 janv. 2020 - Original data for "Chapuis et al., 2020. A young age of subspecific divergence in the desert locust Schistocerca gregaria inferred by ABC Random Forest. Molecular Ecology, 29(23): 4542-4558."
Plain Text - 2,4 KB - MD5: 2d0f8bab75279d89d79e5515e9a4b978
Data
Header of the training dataset for parameter estimation generated by the DIYABC v2.1.0 package (also called the reference table)
ModelChoice_ABCRF.R
14 janv. 2020 - Original data for "Chapuis et al., 2020. A young age of subspecific divergence in the desert locust Schistocerca gregaria inferred by ABC Random Forest. Molecular Ecology, 29(23): 4542-4558."
R Syntax - 4,3 KB - MD5: d724bd294df4271a6c16fadfc40bc5bf
Code
R script to run a single ABC-RF model choice analysis using datasets simulated with the package DIYABC v2.1.0.
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