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File Type: Data

31 to 40 of 1 367 Results

BLUP_spectres_full.RData 8 août 2024 - Performance of phenomic selection in rice: effects of population size and genotype environment interactions on predictive ability R Data - 1,1 GB - MD5: 1c48af60ce9da0da23a9d32d6fd9dd07 BLUP des spectres de grain et paille avec différents pré-traitements, pour les 2 années et les 2 traitements azotés
dataset_for_gpboost_replicate1.csv 15 juil. 2024 - Data and Rscripts for: "Hierarchizing multiscale environmental effects on agricultural pest population dynamics: a case study on the annual onset of Bactrocera dorsalis population growth in Senegalese orchards" Comma Separated Values - 71,3 KB - MD5: ec74f77b9ce3bea5dcb4a80682528049 Data t0 estimates (one replicate) associated with the values of the 28 environmental predictors, for each orchard and year. The site of the orchards is also included as it is used as a random effect in the model.
dataset_for_siland_replicate1.csv 15 juil. 2024 - Data and Rscripts for: "Hierarchizing multiscale environmental effects on agricultural pest population dynamics: a case study on the annual onset of Bactrocera dorsalis population growth in Senegalese orchards" Comma Separated Values - 12,4 KB - MD5: 1479b68b3efb3ea6c5a64a520e379ffe Data t0 estimates for each orchard and year (one replicate), the orchard site, as well as the orchard coordinates (X and Y columns, coordinates in WGS84/UTM 28N).
estimates_t0_lc_500rep.csv 15 juil. 2024 - Data and Rscripts for: "Hierarchizing multiscale environmental effects on agricultural pest population dynamics: a case study on the annual onset of Bactrocera dorsalis population growth in Senegalese orchards" Comma Separated Values - 26,5 MB - MD5: 5b4fd6d6ef0845f0ddef138b290fff50 Data The 500 replicates of t0 estimates used in the analyses presented in the article, and the associated lc values estimated with Siland.
MeanAbundancePerOrchard_2012.csv 15 juil. 2024 - Data and Rscripts for: "Hierarchizing multiscale environmental effects on agricultural pest population dynamics: a case study on the annual onset of Bactrocera dorsalis population growth in Senegalese orchards" Comma Separated Values - 13,0 KB - MD5: 77b5028a9e3ee52775a1b8fece8038b7 Data Input data for t0 estimation, i.e. one file per year containing the mean abundance values of B. dorsalis per week for each orchard (average of captures per week and orchard).
MeanAbundancePerOrchard_2013.csv 15 juil. 2024 - Data and Rscripts for: "Hierarchizing multiscale environmental effects on agricultural pest population dynamics: a case study on the annual onset of Bactrocera dorsalis population growth in Senegalese orchards" Comma Separated Values - 14,7 KB - MD5: d7df444a7be63e0896ae99c777e6d60c Data Input data for t0 estimation, i.e. one file per year containing the mean abundance values of B. dorsalis per week for each orchard (average of captures per week and orchard).
MeanAbundancePerOrchard_2014.csv 15 juil. 2024 - Data and Rscripts for: "Hierarchizing multiscale environmental effects on agricultural pest population dynamics: a case study on the annual onset of Bactrocera dorsalis population growth in Senegalese orchards" Comma Separated Values - 13,5 KB - MD5: 0d4f7fb1767b3b9d4735aadb5fe7a935 Data Input data for t0 estimation, i.e. one file per year containing the mean abundance values of B. dorsalis per week for each orchard (average of captures per week and orchard).
Omicas_GP_phenotypes.csv 4 juil. 2024 - Genomic prediction in upland rice for aluminum tolerance in Latin America Comma Separated Values - 107,4 KB - MD5: dc3ff60a19e36a35dfaa9e28ca7f8d3e phenotypic data acquired on 334 S0:4 families extracted from a synthetic population under two environmental conditions (LIM and ALU) following a p-rep design. Missing data are coded as NA
Z_cucurbitae_microbiota.csv 2 juil. 2024 - Evidence for a gut microbial community conferring adaptability to abiotic and biotic stressors in phytophagous insects: the melon fruit fly Zeugodacus cucurbitae (Diptera:Tephritidae) as case study Comma Separated Values - 1,6 MB - MD5: 07cf8247c48cf826f26f0cabbe675ff0 A table of amplicon sequence variants recording the number of times each ASV was observed in each sample.
trees.csv 13 juin 2024 - Consolidated database on trees in control plots in the M'Baïki forests (CAR) between 1982 and 2022 Comma Separated Values - 436,4 KB - MD5: 90f8516aebf72ecaf43181aad6baba60 Data

BLUP_spectres_full.RData

8 août 2024 - Performance of phenomic selection in rice: effects of population size and genotype environment interactions on predictive ability

R Data - 1,1 GB -

BLUP des spectres de grain et paille avec différents pré-traitements, pour les 2 années et les 2 traitements azotés

dataset_for_gpboost_replicate1.csv

15 juil. 2024 - Data and Rscripts for: "Hierarchizing multiscale environmental effects on agricultural pest population dynamics: a case study on the annual onset of Bactrocera dorsalis population growth in Senegalese orchards"

Comma Separated Values - 71,3 KB -

Data

t0 estimates (one replicate) associated with the values of the 28 environmental predictors, for each orchard and year. The site of the orchards is also included as it is used as a random effect in the model.

dataset_for_siland_replicate1.csv

Comma Separated Values - 12,4 KB -

Data

t0 estimates for each orchard and year (one replicate), the orchard site, as well as the orchard coordinates (X and Y columns, coordinates in WGS84/UTM 28N).

estimates_t0_lc_500rep.csv

Comma Separated Values - 26,5 MB -

Data

The 500 replicates of t0 estimates used in the analyses presented in the article, and the associated lc values estimated with Siland.

MeanAbundancePerOrchard_2012.csv

Comma Separated Values - 13,0 KB -

Data

Input data for t0 estimation, i.e. one file per year containing the mean abundance values of B. dorsalis per week for each orchard (average of captures per week and orchard).

MeanAbundancePerOrchard_2013.csv

Comma Separated Values - 14,7 KB -

Data

Input data for t0 estimation, i.e. one file per year containing the mean abundance values of B. dorsalis per week for each orchard (average of captures per week and orchard).

MeanAbundancePerOrchard_2014.csv

Comma Separated Values - 13,5 KB -

Data

Input data for t0 estimation, i.e. one file per year containing the mean abundance values of B. dorsalis per week for each orchard (average of captures per week and orchard).

Omicas_GP_phenotypes.csv

4 juil. 2024 - Genomic prediction in upland rice for aluminum tolerance in Latin America

Comma Separated Values - 107,4 KB -

phenotypic data acquired on 334 S0:4 families extracted from a synthetic population under two environmental conditions (LIM and ALU) following a p-rep design. Missing data are coded as NA

Z_cucurbitae_microbiota.csv

2 juil. 2024 - Evidence for a gut microbial community conferring adaptability to abiotic and biotic stressors in phytophagous insects: the melon fruit fly Zeugodacus cucurbitae (Diptera:Tephritidae) as case study

Comma Separated Values - 1,6 MB -

A table of amplicon sequence variants recording the number of times each ASV was observed in each sample.

trees.csv

13 juin 2024 - Consolidated database on trees in control plots in the M'Baïki forests (CAR) between 1982 and 2022

Comma Separated Values - 436,4 KB -

Data

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